aid: biodock
name: Biodock
description: >-
  Biodock is an AI platform that makes deep learning easy to train, run, and
  interpret on biological and microscopy images, dramatically accelerating R&D
  image analysis. Researchers upload microscopy images, label and train
  fully-automated deep AI models in a visual labeler (no code required), and run
  those models across large datasets to segment, classify, and quantify objects
  such as cells - producing results comparable to flow cytometry along with
  downloadable object-level and aggregate data. Biodock is used by academic labs
  and Fortune 500 biopharma and life-science organizations, and is SOC 2 Type II
  and ISO 27001 certified. Beyond the visual app, Biodock exposes a public REST
  API (beta) for uploading files to the Biodock Filesystem, submitting analysis
  jobs against published pipelines, tracking job progress, and downloading
  results and segmentation masks - so analysis can be scripted and integrated
  into internal tools and imaging pipelines.
url: https://raw.githubusercontent.com/api-evangelist/biodock/refs/heads/main/apis.yml
x-type: company
x-source: vc-portfolio
x-backed-by:
- a16z
x-tier: stub
x-tier-reason: portfolio-lead
deliveryModel:
  model: saas
  open_source: false
  commercial: true
  callable_host: true
  label: Hosted service · you call their endpoint
  confidence: high
  source:
  - openapi
  - pricing
  generated: '2026-08-28'
  method: derived
accessModel:
  pricing: unknown
  onboarding: unknown
  trial: false
  try_now: false
  public: false
  label: Unknown
  confidence: low
  source:
  - authentication
  - security
  generated: '2026-09-03'
  method: derived
specificationVersion: '0.23'
created: '2026-07-17'
modified: '2026-10-06'
image: https://cdn.prod.website-files.com/63213d26df394911486f698e/637bb41c1cac3a4ded2e9f23_SEOImage.jpg
x-docs-platform: gitbook
x-docs-platform-confidence: high
x-docs-platform-checked: 2026-09-20
tags:
- Company
- Artificial Intelligence
- Machine Learning
- Image Analysis
- Microscopy
- Life Sciences
- Biotechnology
- Computer Vision
- Cell Analysis
- Research
tags_raw:
- Company
- Artificial Intelligence
- Machine Learning
- Image Analysis
- Microscopy
- Life Sciences
- Biotechnology
- Computer Vision
- Cell Analysis
- Research
- Machine-Learning
- Computer-Vision
apis:
- aid: biodock:biodock-analysis-jobs-api
  name: Biodock Analysis Jobs API
  description: Submitting, tracking, and downloading analysis jobs
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Analysis Jobs
  properties:
  - type: OpenAPI
    url: openapi/biodock-analysis-jobs-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
- aid: biodock:biodock-auth-api
  name: Biodock Auth API
  description: API key verification
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Authentication
  tags_raw:
  - Auth
  properties:
  - type: OpenAPI
    url: openapi/biodock-auth-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
- aid: biodock:biodock-files-api
  name: Biodock Files API
  description: Uploading and listing Biodock Filesystem items
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - File
  tags_raw:
  - Files
  properties:
  - type: OpenAPI
    url: openapi/biodock-files-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
- aid: biodock:biodock-pipelines-api
  name: Biodock Pipelines API
  description: Listing published analysis pipelines
  humanURL: https://docs.biodock.ai/public-api/overview
  baseURL: https://app.biodock.ai/api/external
  tags:
  - Pipelines
  properties:
  - type: OpenAPI
    url: openapi/biodock-pipelines-api-openapi.yml
  - type: Authentication
    url: authentication/biodock-authentication.yml
  - type: Conventions
    url: conventions/biodock-conventions.yml
  - type: DataModel
    url: data-model/biodock-data-model.yml
  - type: Documentation
    url: https://docs.biodock.ai/public-api/overview
  - type: APIReference
    url: https://docs.biodock.ai/public-api/resources
  - type: GettingStarted
    url: https://docs.biodock.ai/public-api/authentication
  - type: Examples
    url: https://docs.biodock.ai/public-api/examples
common:
- type: CapabilityMap
  url: capabilities/biodock-capability-edges.yml
  name: Biodock Business Capability Map
- url: https://blog.biodock.ai/rss/
  type: BlogRSS
- type: Website
  url: https://www.biodock.ai/
- type: X-MCPServerCandidate
  url: mcp/biodock-mcp.yml
  note: 'Renamed from MCPServer 2026-09-03 (roadmap#247): the manifest self-describes as status: candidate — a tool list derived from the published API contracts, not an existing server. The scorer already read the manifest and reported mcp_server correctly; the MCPServer type was crediting the artifact-type surfaces with a server that does not exist.'
- type: Overlay
  url: overlays/biodock-public-api-overlay.yaml
- type: DeveloperPortal
  url: https://docs.biodock.ai/
- type: Documentation
  url: https://docs.biodock.ai/
- type: SignUp
  url: https://app.biodock.ai/signup
- type: Login
  url: https://app.biodock.ai/
- type: Blog
  url: https://blog.biodock.ai/
- type: StatusPage
  url: https://biodock.statuspage.io/
- type: Support
  url: https://www.biodock.ai/contact
- type: TermsOfService
  url: https://www.biodock.ai/termsprivacy
- type: PrivacyPolicy
  url: https://www.biodock.ai/termsprivacy
- type: Security
  url: https://www.biodock.ai/security
- type: Compliance
  url: https://www.biodock.ai/security
- type: TrustCenter
  url: https://www.biodock.ai/security
- type: LLMsTxt
  url: llms/biodock-llms.txt
- type: Lifecycle
  url: lifecycle/biodock-lifecycle.yml
- type: Conformance
  url: conformance/biodock-conformance.yml
- type: VulnerabilityDisclosure
  url: security/biodock-vulnerability-disclosure.yml
- type: DomainSecurity
  url: security/biodock-domain-security.yml
- type: AgentSkill
  url: skills/_index.yml
maintainers:
- FN: Kin Lane
  email: kin@apievangelist.com
- FN: APIs.json
  email: info@apis.io
x-enrichment:
  date: '2026-07-19'
  status: backfilled
  pass: local-v1
  note: backfilled from .gitignore signal + verified work evidence