{
  "opencollection": "1.0.0",
  "info": {
    "name": "One Codex API (v1) Account Alignments API",
    "version": "v1"
  },
  "request": {
    "auth": {
      "type": "apikey",
      "key": "X-API-Key",
      "value": "{{X-API-Key}}",
      "placement": "header"
    }
  },
  "items": [
    {
      "info": {
        "name": "Alignments",
        "type": "folder"
      },
      "items": [
        {
          "info": {
            "name": "GET alignments instances",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments",
            "params": [
              {
                "name": "page",
                "value": "",
                "type": "query",
                "description": "Page number. Defaults to 1. See Pagination for more details."
              },
              {
                "name": "per_page",
                "value": "",
                "type": "query",
                "description": "Number of requested paginated records. Defaults to 50. See Pagination for more details."
              },
              {
                "name": "sort",
                "value": "",
                "type": "query",
                "description": "Optional Mongo-style JSON sort clause, e.g., `sort={\"created_at\": true}` to sort by created_at (descending)"
              },
              {
                "name": "where",
                "value": "",
                "type": "query",
                "description": "Optional Mongo-style JSON filter clause, e.g., `where={\"$uri\": {\"$eq\": \"/api/v1/samples/0ee172af60e84f61\"}}`"
              }
            ]
          },
          "docs": "GET alignments instances"
        },
        {
          "info": {
            "name": "GET alignments instances_public",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments/public",
            "params": [
              {
                "name": "page",
                "value": "",
                "type": "query",
                "description": "Page number. Defaults to 1. See Pagination for more details."
              },
              {
                "name": "per_page",
                "value": "",
                "type": "query",
                "description": "Number of requested paginated records. Defaults to 50. See Pagination for more details."
              },
              {
                "name": "sort",
                "value": "",
                "type": "query",
                "description": "Optional Mongo-style JSON sort clause, e.g., `sort={\"created_at\": true}` to sort by created_at (descending)"
              },
              {
                "name": "where",
                "value": "",
                "type": "query",
                "description": "Optional Mongo-style JSON filter clause, e.g., `where={\"$uri\": {\"$eq\": \"/api/v1/samples/0ee172af60e84f61\"}}`"
              }
            ]
          },
          "docs": "GET alignments instances_public"
        },
        {
          "info": {
            "name": "GET alignments",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments/:id",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "GET alignments"
        },
        {
          "info": {
            "name": "POST alignments cancel",
            "type": "http"
          },
          "http": {
            "method": "POST",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/cancel",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "POST alignments cancel"
        },
        {
          "info": {
            "name": "GET alignments file_details",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/file_details",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "GET alignments file_details"
        },
        {
          "info": {
            "name": "GET alignments files",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/files",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "GET alignments files"
        },
        {
          "info": {
            "name": "DELETE alignments files",
            "type": "http"
          },
          "http": {
            "method": "DELETE",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/files",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "DELETE alignments files"
        },
        {
          "info": {
            "name": "GET alignments logs",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/logs",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              },
              {
                "name": "tail",
                "value": "",
                "type": "query"
              }
            ]
          },
          "docs": "GET alignments logs"
        },
        {
          "info": {
            "name": "POST alignments rerun",
            "type": "http"
          },
          "http": {
            "method": "POST",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/rerun",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "POST alignments rerun"
        },
        {
          "info": {
            "name": "GET alignments results",
            "type": "http"
          },
          "http": {
            "method": "GET",
            "url": "https://app.onecodex.com/api/v1/alignments/:id/results",
            "params": [
              {
                "name": "id",
                "value": "",
                "type": "path"
              }
            ]
          },
          "docs": "GET alignments results"
        }
      ]
    }
  ],
  "bundled": true
}